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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs11231243 chr11:62604137 G/A 7.55E-5 490 16.22 14.33 14.27 KM Plot
THCA rs11231247 chr11:62609576 T/C 7.55E-5 488 16.27 14.33 14.27 KM Plot
THCA rs11231248 chr11:62612202 G/T 7.86E-5 490 16.23 14.17 14.27 KM Plot
THCA rs11231249 chr11:62613854 C/G 7.83E-5 490 14.27 14.48 16.2 KM Plot
THCA rs112322309 chr2:48050845 T/C 1.14E-7 487 15.3 17.93 8.27 KM Plot
THCA rs112335390 chr14:78380264 TG/T 2.2E-5 476 15.33 17.42 13.77 KM Plot
THCA rs112361236 chr12:99000358 CACTT/C 3.21E-7 469 15 17.13 21.3 KM Plot
THCA rs112364231 chr2:48052962 C/G 1.14E-7 487 15.3 17.93 8.27 KM Plot
THCA rs11237424 chr11:77945903 A/G 8.2E-5 483 16.8 15.27 11.7 KM Plot
THCA rs11239302 chr10:45485952 C/T 5.16E-9 476 15.93 15.08 12.85 KM Plot
THCA rs11239320 chr10:45509411 G/A 0.000168 484 16.33 14.4 14.93 KM Plot
THCA rs112414724 chr4:39447431 C/T 5.22E-15 487 15.9 16.38 6.1 KM Plot
THCA rs112425217 chr10:104778756 G/A 5.04E-9 490 15.2 17.73 32.1 KM Plot
THCA rs112434205 chr4:39465874 T/A 4.44E-15 489 15.9 17.38 6.1 KM Plot
THCA rs112470865 chr6:90183085 G/A 0.000309 484 16.23 14.33 22.72 KM Plot